CDS

Accession Number TCMCG005C29754
gbkey CDS
Protein Id XP_020244073.1
Location join(102012836..102013098,102020310..102020438,102026617..102026871,102027089..102027170,102028422..102028537,102028606..102028660,102029136..102029247,102030173..102030351,102032165..102032473)
Gene LOC109822303
GeneID 109822303
Organism Asparagus officinalis

Protein

Length 499aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020388484.1
Definition RNA pseudouridine synthase 6, chloroplastic isoform X1

EGGNOG-MAPPER Annotation

COG_category A
Description RNA pseudouridylate synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006206        [VIEW IN EMBL-EBI]
GO:0006213        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008655        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009112        [VIEW IN EMBL-EBI]
GO:0009116        [VIEW IN EMBL-EBI]
GO:0009119        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019858        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043094        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046087        [VIEW IN EMBL-EBI]
GO:0046131        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072527        [VIEW IN EMBL-EBI]
GO:0072528        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGAGGCCTTCTTCATCTCTTGCTTCCCTCTTGCTCTCCAACTCCCTGCTTCCATCTCTTTGTCGAGCATCATCAGCTCAAAAATCCTTAAAAGCTGCATCTTTTATTCCCTCTTCTGCTCTCTCCACTAATTCTCATGTCAAAACTCGTCGCTTTAACAAGGATCTCTGCCGGGTTTCGAAGACTAAGGAGATTAAAGCTTCTACTCCTCTCTCTTCGAAGCTGAAGGAGGTGGAAGTTCCCAAAGATTCTTCCAGTGGGTACCCTGAATATGATCGCTTGCTTCCAAGTACCTTACAACATAGTCCATATCGGGTTGAACATCTTGTAGTTTCTGAGGGGGGAATTGTTCTTGACTACATTTGTAAAGCTTTGCGTCTTCCTCCTCTGTATGTTGCAGATCTGGTCCGCTTTGGAGCTGTGCATTATGCATTGGTGTGCCCGAAGCCACCACCGAGTGCGAGTCCTGAAGAAGTTCAAATTTACAGAGAATTTACACAGCCAGCAGTTCTTCGGAAGAGACCATCCATCAAAGGTAAAACTTTGAGGGAAGCGCAGAAGACATTTAGGATAACAGATGTAAACGAGTTTGTTGAAACTGGCACTTATCTTCGTGTGCATGTGCACCCGAAACGTTTTCCAAGGTGTTACGAAGTTGACTGGAAGTCCAGAATCATTGCAGTCACTGATTTATATGTGGTCCTTGATAAACCAGCTGCGATTTCAGTAGGAGGAACAACGGATAACATTGAGGAATGCTGTGCAACATTTGCTTCTCGTGCCCTGGGACCAGAAACTCCTTTGTGGACAACCCATCAGATAGATAACTGTACTGAAGGATGTGTGGTATTTGCCAGAAACAAGGATTTCTGCCCTGCTTTTCATGGAATGATTAGGGACAAAGAGGTGAAAAAGCTCTATCTTGCTCTTGCTGCTGCTCCTGTGCCAGTTGGAATAATTTCTCACTACATGCGCCCAGTTAATCGTGCTCCGAGAATAGTTTCTGAAGCATTTCTAGATCCTATTGATAGTTGGCATCTCTGTCAACTAGAGGTGCTAGAATGCAAGGAGGTCCCATGGCCAAATGCTAATACTGACAAGAACTACAATATTGATGACTGTGGATGGCCTTTGAAAACCTCTGCATATGAATGTCGAATCAATCTCATAACAGGAAAAACTCATCAGATACGAGCACAATTTGCTGCCATTGGTGCACCAATTGTCGGTGATTCAATATACACACCAGCAGCCATGGCACAAATTGAGAATCCTCATATCAATCCAGTTGGCGCTAGCAAAAGAGAGTATACAAGTGAAGAGGATAAAGAAAAAGCTATTGAAGAATGGGTTTCTTGTCATGGAAAAGAACCAAACACCGCTATCGGTCTCCAAGCTTCTCAAATATCATGGGATGGTGGCAAGGTTTGTTATGAGGCGGGAACTCCATGGTGGAGGCAAAGAACAGATGGAACTAGTTCAGCAGAAAGCTTATGA
Protein:  
MPRPSSSLASLLLSNSLLPSLCRASSAQKSLKAASFIPSSALSTNSHVKTRRFNKDLCRVSKTKEIKASTPLSSKLKEVEVPKDSSSGYPEYDRLLPSTLQHSPYRVEHLVVSEGGIVLDYICKALRLPPLYVADLVRFGAVHYALVCPKPPPSASPEEVQIYREFTQPAVLRKRPSIKGKTLREAQKTFRITDVNEFVETGTYLRVHVHPKRFPRCYEVDWKSRIIAVTDLYVVLDKPAAISVGGTTDNIEECCATFASRALGPETPLWTTHQIDNCTEGCVVFARNKDFCPAFHGMIRDKEVKKLYLALAAAPVPVGIISHYMRPVNRAPRIVSEAFLDPIDSWHLCQLEVLECKEVPWPNANTDKNYNIDDCGWPLKTSAYECRINLITGKTHQIRAQFAAIGAPIVGDSIYTPAAMAQIENPHINPVGASKREYTSEEDKEKAIEEWVSCHGKEPNTAIGLQASQISWDGGKVCYEAGTPWWRQRTDGTSSAESL